MRMFeatureSelector_test Class Reference

#include <OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h>

Inheritance diagram for MRMFeatureSelector_test:

Collaboration diagram for MRMFeatureSelector_test:

Public Member Functions
	MRMFeatureSelector_test ()=default
	~MRMFeatureSelector_test ()=default
void	constructTargTransList_ (const FeatureMap &features, std::vector< std::pair< double, String >> &time_to_name, std::map< String, std::vector< Feature >> &feature_name_map, const bool select_transition_group) const
double	weightScore_ (const double score, const LambdaScore lambda_score) const
double	computeScore_ (const Feature &feature, const std::map< String, LambdaScore > &score_weights) const
String	removeSpaces_ (String str) const
Public Member Functions inherited from MRMFeatureSelectorQMIP
void	optimize (const std::vector< std::pair< double, String >> &time_to_name, const std::map< String, std::vector< Feature >> &feature_name_map, std::vector< String > &result, const SelectorParameters &parameters) const override
Public Member Functions inherited from MRMFeatureSelector
	MRMFeatureSelector ()=default
virtual	~MRMFeatureSelector ()=default
void	selectMRMFeature (const FeatureMap &features, FeatureMap &selected_filtered, const SelectorParameters &parameters) const

Public Attributes
MRMFeatureSelectorQMIP	selector_

Additional Inherited Members
Public Types inherited from MRMFeatureSelector
enum	VariableType { INTEGER = 1, CONTINUOUS }
enum	LambdaScore {   LINEAR = 1, INVERSE, LOG, INVERSE_LOG,   INVERSE_LOG10 }
Protected Member Functions inherited from MRMFeatureSelector
Int	addVariable_ (LPWrapper &problem, const String &name, const bool bounded, const double obj, const VariableType variableType) const
double	computeScore_ (const Feature &feature, const std::map< String, LambdaScore > &score_weights) const
void	addConstraint_ (LPWrapper &problem, std::vector< Int > indices, std::vector< double > values, const String &name, const double lb, const double ub, const LPWrapper::Type param) const

Constructor & Destructor Documentation

MRMFeatureSelector_test()

MRMFeatureSelector_test ( )

default

~MRMFeatureSelector_test()

~MRMFeatureSelector_test ( )

default

Member Function Documentation

computeScore_()

double computeScore_ ( const Feature &  feature, const std::map< String, LambdaScore > &  score_weights  ) const

inline

References MRMFeatureSelector::computeScore_(), and MRMFeatureSelector_test::selector_.

constructTargTransList_()

void constructTargTransList_ ( const FeatureMap &  features, std::vector< std::pair< double, String >> &  time_to_name, std::map< String, std::vector< Feature >> &  feature_name_map, const bool  select_transition_group  ) const

inline

References MRMFeatureSelector::constructTargTransList_(), and MRMFeatureSelector_test::selector_.

removeSpaces_()

String removeSpaces_ ( String  str ) const

inline

References MRMFeatureSelector::removeSpaces_(), and MRMFeatureSelector_test::selector_.

weightScore_()

double weightScore_ ( const double  score, const LambdaScore  lambda_score  ) const

inline

References MRMFeatureSelector_test::selector_, and MRMFeatureSelector::weightScore_().

Member Data Documentation

selector_

MRMFeatureSelectorQMIP selector_

Referenced by MRMFeatureSelector_test::computeScore_(), MRMFeatureSelector_test::constructTargTransList_(), MRMFeatureSelector_test::removeSpaces_(), and MRMFeatureSelector_test::weightScore_().