#include <OpenMS/VISUAL/LayerDataBase.h>

Inheritance diagram for LayerDataDefs:

Collaboration diagram for LayerDataDefs:

Classes
struct	ProjectionData
	Result of computing a projection on X and Y axis in a 2D Canvas; see LayerDataBase::getProjection() More...

Type definitions
enum	DataType { DT_PEAK , DT_CHROMATOGRAM , DT_FEATURE , DT_CONSENSUS , DT_IDENT , DT_UNKNOWN }

enum	Flags { F_HULL , F_HULLS , F_UNASSIGNED , P_PRECURSORS , P_PROJECTIONS , C_ELEMENTS , I_PEPTIDEMZ , I_LABELS , SIZE_OF_FLAGS }
	Flags that determine which information is shown. More...

enum	LabelType { L_NONE , L_INDEX , L_META_LABEL , L_ID , L_ID_ALL , SIZE_OF_LABEL_TYPE }
	Label used in visualization. More...

typedef FeatureMap	FeatureMapType
	Features. More...

typedef boost::shared_ptr< FeatureMap >	FeatureMapSharedPtrType
	SharedPtr on feature map. More...

typedef ConsensusMap	ConsensusMapType
	consensus features More...

typedef boost::shared_ptr< ConsensusMap >	ConsensusMapSharedPtrType
	SharedPtr on consensus features. More...

typedef PeakMap	ExperimentType
	Main data type (experiment) More...

typedef boost::shared_ptr< ExperimentType >	ExperimentSharedPtrType
	SharedPtr on MSExperiment. More...

typedef boost::shared_ptr< const ExperimentType >	ConstExperimentSharedPtrType

typedef boost::shared_ptr< OnDiscMSExperiment >	ODExperimentSharedPtrType
	SharedPtr on On-Disc MSExperiment. More...

typedef boost::shared_ptr< OSWData >	OSWDataSharedPtrType
	SharedPtr on OSWData. More...

static const std::string	NamesOfLabelType [SIZE_OF_LABEL_TYPE]
	Label names. More...

Member Typedef Documentation

◆ ConsensusMapSharedPtrType

typedef boost::shared_ptr<ConsensusMap> ConsensusMapSharedPtrType

SharedPtr on consensus features.

◆ ConsensusMapType

typedef ConsensusMap ConsensusMapType

consensus features

◆ ConstExperimentSharedPtrType

typedef boost::shared_ptr<const ExperimentType> ConstExperimentSharedPtrType

◆ ExperimentSharedPtrType

typedef boost::shared_ptr<ExperimentType> ExperimentSharedPtrType

SharedPtr on MSExperiment.

◆ ExperimentType

typedef PeakMap ExperimentType

Main data type (experiment)

◆ FeatureMapSharedPtrType

typedef boost::shared_ptr<FeatureMap> FeatureMapSharedPtrType

SharedPtr on feature map.

◆ FeatureMapType

typedef FeatureMap FeatureMapType

Features.

◆ ODExperimentSharedPtrType

typedef boost::shared_ptr<OnDiscMSExperiment> ODExperimentSharedPtrType

SharedPtr on On-Disc MSExperiment.

◆ OSWDataSharedPtrType

typedef boost::shared_ptr<OSWData> OSWDataSharedPtrType

SharedPtr on OSWData.

Member Enumeration Documentation

◆ DataType

enum DataType

Dataset types. Order in the enum determines the order in which layer types are drawn.

Enumerator
DT_PEAK	Spectrum profile or centroided data.
DT_CHROMATOGRAM	Chromatogram data.
DT_FEATURE	Feature data.
DT_CONSENSUS	Consensus feature data.
DT_IDENT	Peptide identification data.
DT_UNKNOWN	Undefined data type indicating an error.

◆ Flags

enum Flags

Flags that determine which information is shown.

Enumerator
F_HULL	Features: Overall convex hull.
F_HULLS	Features: Convex hulls of single mass traces.
F_UNASSIGNED	Features: Unassigned peptide hits.
P_PRECURSORS	Peaks: Mark precursor peaks of MS/MS scans.
P_PROJECTIONS	Peaks: Show projections.
C_ELEMENTS	Consensus features: Show elements.
I_PEPTIDEMZ	Identifications: m/z source.
I_LABELS	Identifications: Show labels (not sequences)
SIZE_OF_FLAGS

◆ LabelType

enum LabelType

Label used in visualization.

Enumerator
L_NONE	No label is displayed.
L_INDEX	The element number is used.
L_META_LABEL	The 'label' meta information is used.
L_ID	The best peptide hit of the first identification run is used.
L_ID_ALL	All peptide hits of the first identification run are used.
SIZE_OF_LABEL_TYPE

Member Data Documentation

◆ NamesOfLabelType

const std::string NamesOfLabelType[SIZE_OF_LABEL_TYPE]

static

Label names.

Referenced by TOPPViewBase::changeLabel(), and TOPPViewBase::TOPPViewBase().

Classes

Type definitions