SignalToNoiseOpenMS< ContainerT > Class Template Reference

An implementation of the OpenSWATH SignalToNoise Access interface using OpenMS. More...

#include <OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h>

Inheritance diagram for SignalToNoiseOpenMS< ContainerT >:

Collaboration diagram for SignalToNoiseOpenMS< ContainerT >:

Public Member Functions
	SignalToNoiseOpenMS (ContainerT &chromat, double sn_win_len_, unsigned int sn_bin_count_, bool write_log_messages)
double	getValueAtRT (double RT) override
Public Member Functions inherited from ISignalToNoise
virtual	~ISignalToNoise ()

Private Attributes
const ContainerT &	chromatogram_
OpenMS::SignalToNoiseEstimatorMedian< ContainerT >	sn_

Detailed Description

template<typename ContainerT>
class OpenMS::SignalToNoiseOpenMS< ContainerT >

An implementation of the OpenSWATH SignalToNoise Access interface using OpenMS.

Constructor & Destructor Documentation

SignalToNoiseOpenMS()

SignalToNoiseOpenMS ( ContainerT &  chromat, double  sn_win_len_, unsigned int  sn_bin_count_, bool  write_log_messages  )

inline

References SignalToNoiseOpenMS< ContainerT >::chromatogram_, DefaultParamHandler::getParameters(), SignalToNoiseEstimator< Container >::init(), DefaultParamHandler::setParameters(), Param::setValue(), and SignalToNoiseOpenMS< ContainerT >::sn_.

Member Function Documentation

getValueAtRT()

double getValueAtRT ( double  RT )

inlineoverridevirtual

Implements ISignalToNoise.

References SignalToNoiseOpenMS< ContainerT >::chromatogram_, SignalToNoiseEstimator< Container >::getSignalToNoise(), OpenMS::RT, and SignalToNoiseOpenMS< ContainerT >::sn_.

Member Data Documentation

chromatogram_

const ContainerT& chromatogram_

private

Referenced by SignalToNoiseOpenMS< ContainerT >::getValueAtRT(), and SignalToNoiseOpenMS< ContainerT >::SignalToNoiseOpenMS().

sn_

OpenMS::SignalToNoiseEstimatorMedian< ContainerT > sn_

private

Referenced by SignalToNoiseOpenMS< ContainerT >::getValueAtRT(), and SignalToNoiseOpenMS< ContainerT >::SignalToNoiseOpenMS().