MzTabBase.h File Reference

#include <OpenMS/DATASTRUCTURES/String.h>
#include <OpenMS/CONCEPT/Exception.h>
#include <OpenMS/CONCEPT/LogStream.h>
#include <map>
#include <vector>
#include <list>
#include <algorithm>

Include dependency graph for MzTabBase.h:

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Classes
class	MzTabDouble
class	MzTabDoubleList
class	MzTabInteger
class	MzTabIntegerList
class	MzTabBoolean
class	MzTabString
class	MzTabParameter
class	MzTabParameterList
class	MzTabStringList
class	MzTabSpectraRef
struct	MzTabSoftwareMetaData
struct	MzTabSampleMetaData
struct	MzTabCVMetaData
struct	MzTabInstrumentMetaData
struct	MzTabContactMetaData
class	MzTabBase

Namespaces
	OpenMS
	Main OpenMS namespace.

Typedefs
typedef std::pair< String, MzTabString >	MzTabOptionalColumnEntry

Enumerations
enum	MzTabCellStateType {   MZTAB_CELLSTATE_DEFAULT , MZTAB_CELLSTATE_NULL , MZTAB_CELLSTATE_NAN , MZTAB_CELLSTATE_INF ,   SIZE_OF_MZTAB_CELLTYPE }
	Base functionality to for MzTab data models. More...

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Class Documentation

OpenMS::MzTabSoftwareMetaData

struct OpenMS::MzTabSoftwareMetaData

Collaboration diagram for MzTabSoftwareMetaData:

Class Members
map< Size, MzTabString >	setting
MzTabParameter	software

OpenMS::MzTabSampleMetaData

struct OpenMS::MzTabSampleMetaData

Collaboration diagram for MzTabSampleMetaData:

Class Members
map< Size, MzTabParameter >	cell_type
map< Size, MzTabParameter >	custom
MzTabString	description
map< Size, MzTabParameter >	disease
map< Size, MzTabParameter >	species
map< Size, MzTabParameter >	tissue

OpenMS::MzTabCVMetaData

struct OpenMS::MzTabCVMetaData

Collaboration diagram for MzTabCVMetaData:

Class Members
MzTabString	full_name
MzTabString	label
MzTabString	url
MzTabString	version

OpenMS::MzTabInstrumentMetaData

struct OpenMS::MzTabInstrumentMetaData

Collaboration diagram for MzTabInstrumentMetaData:

Class Members
map< Size, MzTabParameter >	analyzer
MzTabParameter	detector
MzTabParameter	name
MzTabParameter	source

OpenMS::MzTabContactMetaData

struct OpenMS::MzTabContactMetaData

Collaboration diagram for MzTabContactMetaData:

Class Members
MzTabString	affiliation
MzTabString	email
MzTabString	name