This is the complete list of members for RTSimulation, including all inherited members.
| calculateMT_(SimTypes::FeatureMapSim &features, std::vector< double > &predicted_retention_times) | RTSimulation | private |
| check_defaults_ | DefaultParamHandler | protected |
| createExperiment(SimTypes::MSSimExperiment &experiment) | RTSimulation | |
| DefaultParamHandler(const String &name) | DefaultParamHandler | |
| DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
| DefaultParamHandler() | DefaultParamHandler | private |
| defaults_ | DefaultParamHandler | protected |
| defaultsToParam_() | DefaultParamHandler | protected |
| egh_tau_location_ | RTSimulation | private |
| egh_tau_scale_ | RTSimulation | private |
| egh_variance_location_ | RTSimulation | private |
| egh_variance_scale_ | RTSimulation | private |
| error_name_ | DefaultParamHandler | protected |
| getChargeContribution_(Map< String, double > &q_cterm, Map< String, double > &q_nterm, Map< String, double > &q_aa_basic, Map< String, double > &q_aa_acidic) | RTSimulation | private |
| getDefaults() const | DefaultParamHandler | |
| getGradientTime() const | RTSimulation | |
| getName() const | DefaultParamHandler | |
| getParameters() const | DefaultParamHandler | |
| getSubsections() const | DefaultParamHandler | |
| gradient_max_ | RTSimulation | private |
| gradient_min_ | RTSimulation | private |
| isRTColumnOn() const | RTSimulation | |
| noRTColumn_(SimTypes::FeatureMapSim &) | RTSimulation | private |
| operator=(const RTSimulation &source) | RTSimulation | |
| OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
| operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
| param_ | DefaultParamHandler | protected |
| predictContaminantsRT(SimTypes::FeatureMapSim &) | RTSimulation | |
| predictRT(SimTypes::FeatureMapSim &features) | RTSimulation | |
| rnd_gen_ | RTSimulation | protected |
| rt_model_file_ | RTSimulation | private |
| rt_sampling_rate_ | RTSimulation | private |
| RTSimulation() | RTSimulation | |
| RTSimulation(SimTypes::MutableSimRandomNumberGeneratorPtr random_generator) | RTSimulation | explicit |
| RTSimulation(const RTSimulation &source) | RTSimulation | |
| setDefaultParams_() | RTSimulation | private |
| setName(const String &name) | DefaultParamHandler | |
| setParameters(const Param ¶m) | DefaultParamHandler | |
| smoothRTDistortion_(SimTypes::MSSimExperiment &experiment) | RTSimulation | private |
| subsections_ | DefaultParamHandler | protected |
| total_gradient_time_ | RTSimulation | private |
| updateMembers_() override | RTSimulation | protectedvirtual |
| warn_empty_defaults_ | DefaultParamHandler | protected |
| wrapSVM(std::vector< AASequence > &peptide_sequences, std::vector< double > &predicted_retention_times) | RTSimulation | |
| writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &prefix="") | DefaultParamHandler | static |
| ~DefaultParamHandler() | DefaultParamHandler | virtual |
| ~RTSimulation() override | RTSimulation | |
1.8.16
