UnimodXMLHandler Member List

This is the complete list of members for UnimodXMLHandler, including all inherited members.

ActionMode enum name	XMLHandler
asBool_(const String &in)	XMLHandler	inlineprotected
asDateTime_(String date_string)	XMLHandler	inlineprotected
asDouble_(const String &in)	XMLHandler	inlineprotected
asFloat_(const String &in)	XMLHandler	inlineprotected
asInt_(const String &in)	XMLHandler	inlineprotected
asInt_(const XMLCh *in)	XMLHandler	inlineprotected
asUInt_(const String &in)	XMLHandler	inlineprotected
attributeAsDouble_(const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
attributeAsInt_(const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
attributeAsIntList_(const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
attributeAsString_(const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
attributeAsStringList_(const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
avge_mass_	UnimodXMLHandler	private
characters(const XMLCh *const chars, const XMLSize_t) override	UnimodXMLHandler
checkUniqueIdentifiers_(const std::vector< ProteinIdentification > &prot_ids)	XMLHandler
cv_terms_	XMLHandler	protected
cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0)	XMLHandler	inlineprotected
diff_formula_	UnimodXMLHandler	private
endElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname) override	UnimodXMLHandler
equal_(const XMLCh *a, const XMLCh *b) const	XMLHandler	inlineprotected
error(const xercesc::SAXParseException &exception) override	XMLHandler
error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const	XMLHandler
error_message_	XMLHandler	mutableprotected
errorString()	XMLHandler
expectList_(const String &str) const	XMLHandler	inlineprivate
fatalError(const xercesc::SAXParseException &exception) override	XMLHandler
fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const	XMLHandler
file_	XMLHandler	protected
getLoadDetail() const	XMLHandler	virtual
LD_ALLDATA enum value	XMLHandler
LD_COUNTS_WITHOPTIONS enum value	XMLHandler
LD_RAWCOUNTS enum value	XMLHandler
LOAD enum value	XMLHandler
load_detail_	XMLHandler	protected
LOADDETAIL enum name	XMLHandler
modification_	UnimodXMLHandler	private
modifications_	UnimodXMLHandler	private
mono_mass_	UnimodXMLHandler	private
neutral_loss_avg_masses_	UnimodXMLHandler	private
neutral_loss_diff_formula_	UnimodXMLHandler	private
neutral_loss_diff_formulas_	UnimodXMLHandler	private
neutral_loss_mono_masses_	UnimodXMLHandler	private
open_tags_	XMLHandler	protected
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const	XMLHandler	inlineprotected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const	XMLHandler	inlineprotected
reset()	XMLHandler
setLoadDetail(const LOADDETAIL d)	XMLHandler	virtual
sites_	UnimodXMLHandler	private
sm_	XMLHandler	protected
startElement(const XMLCh *const, const XMLCh *const, const XMLCh *const qname, const xercesc::Attributes &attributes) override	UnimodXMLHandler
STORE enum value	XMLHandler
tag_	UnimodXMLHandler	private
term_specs_	UnimodXMLHandler	private
UnimodXMLHandler(std::vector< ResidueModification * > &mods, const String &filename)	UnimodXMLHandler
version_	XMLHandler	protected
warning(const xercesc::SAXParseException &exception) override	XMLHandler
warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const	XMLHandler
was_valid_peptide_modification_	UnimodXMLHandler	private
writeTo(std::ostream &)	XMLHandler	virtual
writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const	XMLHandler	protected
writeXMLEscape(const String &to_escape)	XMLHandler	inlinestatic
XMLHandler(const String &filename, const String &version)	XMLHandler
XMLHandler()	XMLHandler	private
~UnimodXMLHandler() override	UnimodXMLHandler
~XMLHandler() override	XMLHandler