Class ConsensusMapArrowExport: This API is experimental and may change in future versions.
Class ConsensusMapArrowIO: This API is experimental and may change in future versions.
Class EGHTraceFitter: Needs further testing on real data. Note that the tests are currently also focused on testing the EGH as replacement for the gaussian.
Page Epifany: This tool is work in progress and usage and input requirements might change.
Class FeatureMapArrowIO: This API is experimental and may change in future versions.
Page IDDecoyProbability: This util is deprecated and might behave not as expected!
Page IDPosteriorErrorProbability: This tool has not been tested thoroughly and might behave not as expected!
Page MaRaClusterAdapter: This tool is work in progress and usage and input requirements might change.
Page MRMPairFinder: This software is experimental and might contain bugs!
Class MSExperimentArrowExport: This API is experimental and may change in future versions. The table schema, column names, and data types are subject to modification based on user feedback and evolving requirements.
Page MzTabExporter: This algorithm and underlying format is work in progress and might change.
Page PercolatorAdapter: This tool is work in progress and usage and input requirements might change.
Class ProteinGroupArrowExport: This API is experimental and may change in future versions.
Class ProteinIdentificationArrowIO: This API is experimental and may change in future versions.
Page PSMFeatureExtractor: Parts of this tool are still work in progress and usage and input requirements or output might change. (multiple_search_engine, Mascot support)
Class QPXFile: This API is experimental and may change in future versions.
Page SpectraMerger: This TOPP-tool is not well tested and not all features might be properly implemented and tested!
Class XFDRAlgorithm: This tool is work in progress and usage and input requirements might change.