This is the complete list of members for OpenSwathScoring, including all inherited members.

add_up_spectra_	OpenSwathScoring	private
apply_im_peak_picking_	OpenSwathScoring	private
calculateChromatographicIdScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< std::string > &native_ids_identification, const std::vector< std::string > &native_ids_detection, std::vector< OpenSwath::ISignalToNoisePtr > &signal_noise_estimators, OpenSwath_Ind_Scores &scores) const	OpenSwathScoring
calculateChromatographicScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< std::string > &native_ids, const std::vector< std::string > &precursor_ids, const std::vector< double > &normalized_library_intensity, std::vector< OpenSwath::ISignalToNoisePtr > &signal_noise_estimators, OpenSwath_Scores &scores) const	OpenSwathScoring
calculateDIAIdScores(OpenSwath::IMRMFeature *imrmfeature, const TransitionType &transition, MRMTransitionGroupType &transition_group_detection, const std::vector< OpenSwath::SwathMap > &swath_maps, RangeMobility &range_im, const OpenMS::DIAScoring &diascoring, OpenSwath_Scores &scores, const double drift_target)	OpenSwathScoring
calculateDIAScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< TransitionType > &transitions, const std::vector< OpenSwath::SwathMap > &swath_maps, const OpenSwath::SpectrumAccessPtr &ms1_map, const OpenMS::DIAScoring &diascoring, const CompoundType &compound, OpenSwath_Scores &scores, std::vector< double > &mzerror_ppm, const double drift_target, const RangeMobility &range_im)	OpenSwathScoring
calculateLibraryScores(OpenSwath::IMRMFeature *imrmfeature, const std::vector< TransitionType > &transitions, const CompoundType &compound, const double normalized_feature_rt, OpenSwath_Scores &scores)	OpenSwathScoring
calculatePrecursorDIAScores(const OpenSwath::SpectrumAccessPtr &ms1_map, const OpenMS::DIAScoring &diascoring, double precursor_mz, double rt, const CompoundType &compound, RangeMobility im_range, OpenSwath_Scores &scores)	OpenSwathScoring
CompoundType typedef	OpenSwathScoring	private
fetchSpectrumSwath(std::vector< OpenSwath::SwathMap > swath_maps, double RT, int nr_spectra_to_add, const RangeMobility &im_range)	OpenSwathScoring
fetchSpectrumSwath(OpenSwath::SpectrumAccessPtr swath_map, double RT, int nr_spectra_to_add, const RangeMobility &im_range)	OpenSwathScoring
getNormalized_library_intensities_(const std::vector< TransitionType > &transitions, std::vector< double > &normalized_library_intensity)	OpenSwathScoring
im_drift_extra_pcnt_	OpenSwathScoring	private
initialize(double rt_normalization_factor, int add_up_spectra, double spacing_for_spectra_resampling, double merge_spectra_by_peak_width_fraction, const double drift_extra, const OpenSwath_Scores_Usage &su, const std::string &spectrum_addition_method, const std::string &spectrum_merge_method_type, bool use_ms1_ion_mobility, bool apply_im_peak_picking)	OpenSwathScoring
ION_MOBILITY_DESCRIPTION	OpenSwathScoring	private
merge_spectra_by_peak_width_fraction_	OpenSwathScoring	private
MRMTransitionGroupType typedef	OpenSwathScoring	private
OpenSwathScoring()	OpenSwathScoring
rt_normalization_factor_	OpenSwathScoring	private
spacing_for_spectra_resampling_	OpenSwathScoring	private
spectra_addition_method_	OpenSwathScoring	private
spectra_merge_method_type_	OpenSwathScoring	private
SpectrumAdditionMethod enum name	OpenSwathScoring	private
SpectrumMergeMethodType enum name	OpenSwathScoring	private
su_	OpenSwathScoring	private
TransitionType typedef	OpenSwathScoring	private
use_ms1_ion_mobility_	OpenSwathScoring	private
~OpenSwathScoring()	OpenSwathScoring